Knowing how to accept payments online is no longer only an ecommerce concern. Service businesses, contractors, freelancers, B2B teams, and retailers all need a simple way for customers to pay by card, digital wallet, or bank transfer without a phone call or paper check.

The right setup depends on how you sell. An online store may need checkout built into its website, while a service business may be better served by payable invoices or payment links. The goal is the same: make it easy for customers to pay while keeping fees, security, and bookkeeping under control.

  • Businesses can accept payments online through website checkout, payment links, online invoices, and recurring billing.
  • Cards and digital wallets help reduce checkout friction, while ACH payments can be a lower-cost option for larger invoices and repeat clients.
  • Choose a payment provider based on the way you sell, payment methods, fees, payout timing, security, and integrations.
  • Use a PCI-compliant payment platform instead of collecting or storing customer card details yourself.

The best way to accept payments online depends on how you sell

The best ways to accept payments online are not identical for every business. Start with the payment flow your business needs and your customers prefer, then choose software that supports it.

If you need to…Best optionBest for
Sell products from a websiteOnline checkoutEcommerce stores
Get paid without an online storePayment linkFreelancers, contractors, and local services
Bill after work is completePayable invoiceB2B and project-based businesses
Collect repeat paymentsRecurring billing or autopayMemberships, retainers, and subscriptions
Collect a deposit before work beginsPayment link or invoiceContractors and service businesses

Many businesses use more than one method. A home services company, for example, may send an invoice after a completed job, request a deposit through a payment link, and set up recurring payments for maintenance plans.

How to accept payments online in five steps

1. Choose the payment flow first

Before comparing processors, decide how customers should pay you.

If customers browse products and complete a purchase on your site, use an online checkout. If you sell services, a payable invoice may be more appropriate because it can include line items, due dates, payment terms, and a record of completed work.

Payment links are useful when you need to take payment online without building an ecommerce site. You can share them by email, text, proposal, social message, or QR code. Recurring billing is a better fit when customers pay the same amount on a regular schedule.

Related: Ecommerce Payment Processing

2. Choose the payment methods your customers expect

Most small businesses should consider offering:

  • Credit and debit cards
  • Digital wallets, such as Apple Pay and Google Pay
  • ACH bank payments
  • Buy now, pay later for qualifying higher-value purchases
  • Recurring autopay for repeat clients or subscriptions

Cards and digital wallets are familiar and convenient for customers. ACH payments move money directly from a customer’s bank account and may cost less than card processing, which can make them useful for larger invoices, B2B payments, and recurring billing.

You do not need to enable every possible option on day one. Start with the methods your customers are most likely to use, then review payment data after a few months.

3. Select a payment provider that fits your existing tools

A payment provider should do more than process a transaction. It should fit the systems you already use to sell, invoice, fulfill orders, and manage your books.

Compare providers based on:

  • Website and ecommerce integrations
  • Payment links and payable invoices
  • Recurring billing support
  • Card, wallet, and ACH payment options
  • Transaction, monthly, chargeback, and payout fees
  • Payout timing
  • Fraud prevention and dispute tools
  • Accounting, CRM, and order management integrations
  • Customer support and account approval requirements

For a deeper provider comparison, see our guides to the best payment processors and ACH payment processing.

Once you choose a provider, you will usually need to create an account, complete identity and business verification, connect a bank account, and choose where deposits should go.

Then, create the payment method that fits the sale:

  • Add checkout to your website
  • Create a payment link for a specific product, service, or deposit
  • Send an invoice with online payment options
  • Set up a recurring payment schedule for repeat customers

For example, QuickBooks Payments lets eligible businesses send online invoices and quick payment requests, then accept card, ACH, Apple Pay, PayPal, Venmo, and eligible Affirm payments. If you use QuickBooks Online, payment activity can also sync with your accounting records. 

5. Test the customer experience before sharing it

Test every payment flow from the customer’s point of view before sending it out.

Check that:

  • The page works on desktop and mobile
  • Product descriptions, invoice details, taxes, and amounts are accurate
  • Customers receive a clear payment confirmation and receipt
  • You receive a payment notification
  • Deposits reach the expected account
  • Payment status updates in your accounting or order management system

A small issue at checkout can lead to abandoned purchases, delayed invoices, or support requests. Testing is one of the easiest ways to prevent those problems.

Four ways to take payment online

Add online checkout to your website

Online checkout is the standard option for ecommerce businesses. Customers add products to their cart, enter payment details, and complete the purchase without needing a separate invoice or follow-up message.

You can use a hosted checkout page from your payment provider or embed payment fields directly into your site. Hosted checkout is often easier for smaller businesses because the provider manages much of the payment page setup and card data handling.

Look for a checkout option that supports mobile payments, digital wallets, tax settings, discount codes, and the ecommerce platform you already use.

Payment links let you accept payment online without an online store. Create a link for a set amount or a specific item, then share it with the customer.

They work well for:

  • Deposits
  • One-time service charges
  • Event registrations
  • Custom orders
  • Social media sales
  • Quotes and proposals
  • Follow-up payments after a phone conversation

Use a clear description and reference number whenever possible. A customer should be able to tell exactly what the link is for before entering payment details.

Send online invoices

Online invoices are a strong fit for service businesses, contractors, consultants, agencies, and B2B sellers. They provide a professional record of the work, amount due, due date, and payment terms while giving customers a direct way to pay.

A good online invoicing process should let you:

  • Add itemized charges and taxes
  • Set due dates and payment terms
  • Accept cards, ACH, and digital wallets where available
  • Track when an invoice is viewed and paid
  • Send automatic reminders
  • Save customer payment preferences for authorized recurring payments

Set up recurring payments

Recurring payments are useful for subscriptions, retainers, membership dues, maintenance plans, and ongoing services. Instead of manually sending the same invoice each month, you set a schedule and obtain the customer’s authorization to charge them automatically.

Before setting up recurring billing, make sure you have:

  • Clear customer authorization
  • A stated billing amount and schedule
  • A process for notifying customers about changes
  • A way for customers to update payment details
  • A retry process for failed payments
  • A cancellation and refund policy

Recurring billing can reduce administrative work, but only when customers understand what they are agreeing to and can easily contact you with billing questions. You can read more about our top recommendations in our recurring billing software buyer’s guide.

What you need to accept online payments

A payment processor, gateway, and merchant account

Online payments involve several behind-the-scenes functions.

A payment processor routes the transaction between your business, the card network, and the customer’s bank. A payment gateway securely passes payment information from your website or invoice to the processor. A merchant account is where card-payment funds are held before they are deposited into your bank account.

Many small business payment platforms combine these functions. That means you may not need to open separate accounts with a gateway provider, merchant-services company, and processor.

Related: 

A secure payment environment

Payment security should be part of the setup process, not an afterthought. Choose a reputable provider that supports PCI DSS requirements and uses encryption to protect payment data.

For most small businesses, the safest route is to use provider-hosted checkout pages, payment links, or hosted invoice payment fields. This limits your exposure to raw card data and reduces the effort of managing payment security on your own.

You should also use strong passwords, enable two-factor authentication, and limit access to refund, payment, and payout settings.

A business bank account and verification details

Payment providers typically ask for information to verify your business before you can begin accepting online payments. Be prepared to provide:

  • Legal business name
  • Business address and contact details
  • Employer Identification Number or Social Security number, where applicable
  • Owner or authorized representative information
  • Bank account details for deposits
  • Website, product details, or a description of what you sell

Approval time varies by provider and business type. High-risk industries, newer businesses, and businesses with unclear sales descriptions may receive additional review.

How much does it cost to accept payments online?

The cost of accepting online payments usually includes a percentage of each sale and, in some cases, a fixed amount per transaction. Costs can vary by payment method and provider.

Common expenses include:

  • Online card processing fees
  • ACH processing fees
  • Monthly software or gateway fees
  • Chargeback and dispute fees
  • Instant deposit fees
  • International payment and currency conversion fees
  • Optional recurring billing or fraud prevention tools

Online card payments often cost more than in-person transactions because the business does not physically verify the card at checkout. ACH may be a better-value option for large invoices because its fees are commonly lower than card rates.

For reference, QuickBooks currently lists a 2.99% rate for eligible invoice, recurring payment, and quick-request card and digital wallet payments, plus 1% for ACH payments. Rates, eligibility, and available payment methods can change, so verify current terms before choosing a provider.

Do not choose a provider on the headline rate alone. A lower rate can be offset by monthly fees, slower payouts, expensive add-ons, limited payment methods, or a poor fit with your accounting software.

How to make online payments safer for your business and customers

Accepting online payments brings fraud and dispute risk, but you can reduce it with the right process.

  • Use a PCI-compliant payment provider and hosted payment fields.
  • Enable two-factor authentication for anyone with access to payment settings.
  • Use clear business names and billing descriptions so customers recognize the charge.
  • Send receipts immediately after payment.
  • Keep your return, cancellation, and refund policies easy to find.
  • Require written or digital authorization for recurring payments.
  • Watch for unusual order sizes, repeated failed attempts, and mismatched customer details.
  • Limit employee access to refunds, customer data, and bank account changes.
  • Keep contracts, invoices, delivery confirmation, and customer communication in case of a dispute.

Clear documentation helps prevent misunderstandings and gives you stronger evidence if a customer disputes a charge.

How to choose the right online payment solution

The right payment solution should match the way your business earns revenue.

  • Service businesses and B2B teams should prioritize payable invoices, ACH, payment reminders, deposit collection, and accounting integration.
  • Ecommerce businesses should look for fast website checkout, digital wallets, fraud tools, inventory and order integrations, and clear payout reporting.
  • Subscription businesses need recurring billing, automatic retries, authorization tools, card update options, and reporting that shows failed and successful payments.
  • Mobile and local businesses may need payment links and invoicing for remote payments, plus an option for in-person card acceptance when customers pay on site.
  • Growing businesses with developers may prioritize APIs, customizable checkout, advanced reporting, multi-channel payments, and international options.

Common mistakes to avoid when accepting payments online

Avoid these issues when building your online payment process:

  • Choosing a provider based only on its advertised transaction rate
  • Offering only card payments when ACH would help with larger invoices
  • Launching a checkout page without testing it on mobile
  • Sending unclear payment links with no service description or reference number
  • Forgetting invoice reminders and overdue payment workflows
  • Failing to connect payments with accounting records
  • Storing customer card details manually
  • Using vague refund, delivery, or cancellation policies

Frequently asked questions

Payment links and payable invoices are often the easiest options for businesses that do not need a full ecommerce site. Ecommerce sellers usually need an online checkout connected to their website or store platform.

No. You can take payment online through payment links, digital invoices, and virtual terminals without operating an ecommerce website.

Many modern payment providers bundle merchant-account services with their payment platform. You may not need to open a separate merchant account, but the provider still needs to approve your business before processing payments.

Use a reputable PCI-compliant payment provider, avoid handling raw card information yourself, enable two-factor authentication, and keep clear records of invoices, customer authorization, policies, and receipts.

Card authorizations happen quickly, but deposits usually take one or more business days depending on the provider, payment method, account status, and payout schedule. Some providers offer instant or same-day deposit options for an added fee.

Bottom line

Accepting payments online works best when the process reflects the way your customers buy. Start with the right payment flow, offer the methods customers expect, and choose a provider that keeps payment collection and recordkeeping connected.

For businesses that want to send payable invoices, accept several online payment methods, and manage payment activity alongside accounting records, QuickBooks Payments is one option to consider. Read my QuickBooks Payments review.